部分代表论文(*共同第一作者):
1. Zhang P*, Gao C*, Hua K, Zhang ZY, Li S. Systematically decoding pathological morphologies and molecular profiles with unified multimodal embedding. Nature Methods 23, 903–908 (2026). (新华社、基金委报道)
2. Zhang P, Zhang Q, Li S. Advancing Cancer Prevention through an AI-Based Integration of Traditional and Western Medicine. Cancer Discovery 2024;14(11):2033-2036. (该杂志首篇中医药主题论文)
3. Zhang P*, Gao C*, Zhang Z, Yuan Z, Zhang Q, Zhang P, Du S, Zhou W, Li Y, Li S. Systematic inference of super-resolution cell spatial profiles from histology images. Nature Communications. 2025;16(1):1838.(高被引论文)
4. Zhang P, Yang M, Zhang Y, Xiao S, Lai X, Tan A, Du S, Li S. Dissecting the Single-Cell Transcriptome Network Underlying Gastric Premalignant Lesions and Early Gastric Cancer. Cell Reports. 2019 May 7;27(6):1934-1947.e5. (F1000杰出论文,2019年中国生物信息学十大应用、单细胞测序领域最受关注科研进展,>被引500次)
5. Zhang P*, Zhang DF*, Zhou WA*, Wang L, Wang BY, Zhang TY, Li S. Network pharmacology: towards the artificial intelligence-based precision traditional Chinese medicine. Brief Bioinform. 2023 Nov 22;25(1): bbad518. (>被引800次, ESI全球top 0.1%热点论文、高被引论文,杂志最高阅读量论文)
6. Zhang P, Li S. Human cross-tissue cell atlases: unprecedented resources towards systematic understanding of physiology and diseases. Signal Transduct Target Ther. 2022 Oct 5;7(1):352. (IF = 38.10, Research Highlight)
7. Zhang P, Wang B, Li S. Network-based cancer precision prevention with artificial intelligence and multi-omics. Science Bulletin. 2023;68(12):1219-1222.
8. Guo JC*, Zhang P*, Zhou L*, You L*, Liu QF, Zhang ZG, Sun B, Liang ZY, Lu J, Yuan D, Tan AD, Sun J, Liao Q, Dai MH, Xiao GG, Li S, Zhang TP. Prognostic and predictive value of a five-molecule panel in resected pancreatic ductal adenocarcinoma: A multicentre study. EBioMedicine. 2020 Apr 28;55:102767. (封面论文)
9. Hou S*, Zhang P*, Yang K*, Wang L, Ma C, Li Y, Li S. Decoding multilevel relationships with the human tissue-cell-molecule network. Brief Bioinform. 2022 Sep 20;23(5):bbac170.
10. Zhang F*, Zhou Z*, Zhang P*, Li S. Multi-Omics Meets Premalignancy: Paving the Way for Early Prevention of Cancer. Research (Wash D C). 2025;8:0930.